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1

Kinetics of comet formation in single-cell gel electrophoresis: Loops and fragments

Katerina Afanasieva, Marianna Zazhytska, Andrei Sivolob

Journal:

ELECTROPHORESIS

Year:

2010

Language:

english

File:

PDF, 348 KB

english, 2010

2

Physical principles and new applications of comet assay

Afanasieva, Katerina, Sivolob, Andrei

Journal:

Biophysical Chemistry

Year:

2018

Language:

english

File:

PDF, 824 KB

english, 2018

3

Electrostatic contribution to the bending of DNA

Andrei Sivolob, Sergei N. Khrapunov

Journal:

Biophysical Chemistry

Year:

1997

Language:

english

File:

PDF, 1.13 MB

english, 1997

4

Translational Positioning of Nucleosomes on DNA: The Role of Sequence-dependent Isotropic DNA Bending Stiffness

Andrei V. Sivolob, Sergei N. Khrapunov

Journal:

Journal of Molecular Biology

Year:

1995

Language:

english

File:

PDF, 830 KB

english, 1995

5

Nucleosome Dynamics. II. High Flexibility of Nucleosome Entering and Exiting DNAs to Positive Crossing. An Ethidium Bromide Fluorescence Study of Mononucleosomes on DNA Minicircles

Andrei Sivolob, Filomena De Lucia, Bernard Révet, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 471 KB

english, 1999

6

Nucleosome Dynamics. III. Histone Tail-dependent Fluctuation of Nucleosomes Between Open and Closed DNA Conformations. Implications for Chromatin Dynamics and the Linking Number Paradox. A Relaxation Study of Mononucleosomes on DNA Minicircles

Filomena De Lucia, Mohamed Alilat, Andrei Sivolob, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 371 KB

english, 1999

7

Nucleosome dynamics IV. protein and DNA contributions in the chiral transition of the tetrasome, the histone (H3-H4)2 tetramer-DNA particle

Mohamed Alilat, Andrei Sivolob, Bernard Révet, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 1.06 MB

english, 1999

8

Nucleosome dynamics.V. ethidium bromide versus histone tails in modulating ethidium bromide-driven tetrasome chiral transition. A fluorescence study of tetrasomes on DNA minicircles

Andrei Sivolob, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 335 KB

english, 2000

9

Nucleosome dynamics. VI. histone tail regulation of tetrasome chiral transition. A relaxation study of tetrasomes on DNA minicircles

Andrei Sivolob, Filomena De Lucia, Mohamed Alilat, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 462 KB

english, 2000

10

CENP-A-containing Nucleosomes: Easier Disassembly versus Exclusive Centromeric Localization

Natalia Conde e Silva, Ben E. Black, Andrei Sivolob, Jan Filipski, Don W. Cleveland, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 3.47 MB

english, 2007

11

Nucleosome Chiral Transition under Positive Torsional Stress in Single Chromatin Fibers

Aurélien Bancaud, Gaudeline Wagner, Natalia Conde e Silva, Christophe Lavelle, Hua Wong, Julien Mozziconacci, Maria Barbi, Andrei Sivolob, Eric Le Cam, Liliane Mouawad, Jean-Louis Viovy, Jean-Marc Vic

Journal:

Year:

2007

Language:

english

File:

PDF, 1.59 MB

english, 2007

12

Sequence-dependent Nucleosome Structural and Dynamic Polymorphism. Potential Involvement of Histone H2B N-Terminal Tail Proximal Domain

Andrei Sivolob, Christophe Lavelle, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 1.07 MB

english, 2003

13

Linker Histone-dependent Organization and Dynamics of Nucleosome Entry/Exit DNAs

Andrei Sivolob, Ariel Prunell

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 1.61 MB

english, 2003

14

DNA loop domain organization as revealed by single-cell gel electrophoresis

Afanasieva, Katerina, Chopei, Marianna, Zazhytska, Marianna, Vikhreva, Maria, Sivolob, Andrei

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research

Year:

2013

Language:

english

File:

PDF, 1.06 MB

english, 2013

15

Kinetics and Thermodynamics of the Unfolding and Refolding of the Three-Stranded α-Helical Coiled Coil, Lpp-56 †

Dragan, Anatoly I., Potekhin, Sergey A., Sivolob, Andrei, Lu, Min, Privalov, Peter L.

Journal:

Year:

2004

Language:

english

File:

PDF, 265 KB

english, 2004

16

Single nucleus versus single-cell gel electrophoresis: Kinetics of DNA track formation

Afanasieva, Katerina, Chopei, Marianna, Sivolob, Andrei

Journal:

ELECTROPHORESIS

Year:

2015

Language:

english

File:

PDF, 294 KB

english, 2015

17

DNA loop domain organization in nucleoids from cells of different types

Afanasieva, Katerina, Chopei, Marianna, Lozovik, Alexandra, Semenova, Anastasia, Lukash, Lyubov, Sivolob, Andrei

Journal:

Biochemical and Biophysical Research Communications

Year:

2017

Language:

english

File:

PDF, 676 KB

english, 2017